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Collins BC, Shapiro JB, Scheib MM, Musci RV, Verma M, Kardon G. 2024. Three-dimensional imaging studies in mice identify cellular dynamics of skeletal muscle regeneration. Developmental Cell


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Shapiro MD, Dominy NJ, Kardon G, Letsou A. Science at Sundance 2024. Science 383 (6687): 1052-1056


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Rao J, Djeffal Y, Chal J, Marchiano F, Wang C-H, Tanoury ZA, Gapon S, Mayeuf-Louchart A, Glass I, Sefton EM, Habermann B, Kardon G, Watt FM, Tseng Y-H, and Pourquie O. Reconstructing human brown fat developmental trajectory in vitro. 2024. Developmental Cell 58: 2359-2375.


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Venkatraman V, Barry AE, Dominy NJ, and Kardon G. 2023 Science at Sundance 2023. Science Mar 3; 379 (6635): 874-878


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Burns NG and Kardon G. 2023. The role of genes and environment in the etiology of congenital diaphragmatic hernias. Current Topics in Developmental Biology 152: 115-138.


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Sefton EM, Gallardo M, Tobin CE, Collins BC, Colasanto MP, Merrell AJ, Kardon G. 2022. Fibroblast-derived HGF controls recruitment and expansion of muscle during morphogenesis of the mammalian diaphragm. eLife Sept 26; 11:e74592


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Roth S, Chandra A, Brown L, and Kardon G 2022. Science at Sundance 2022. Science 375 (6583): 812-815


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Collins BC and Kardon G. 2021. It takes all kinds: heterogeneity among satellite cells and fibro-adipogenic progenitors during skeletal muscle regeneration. Development 147


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Bogenschutz EL, Fox ZD, Farrell A, Wynn J, Moore B, Yu L, Aspelund G, Marth G, Yandell M. Shen Y, Chung WK, and Kardon G. 2020. Deep whole-genome sequencing of multiple proband tissues and parental blood reveals the complex genetic etiology of congenital diaphragmatic hernias. HGG Advances 1(1)


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Bogenschutz EL, Sefton EM, Kardon G. 2020. Cell culture system to assay candidate genes and molecular pathways implicated in congenital diaphragmatic hernias. Developmental Biology Nov 1;467(1-2):30-38.


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Agarwal M, Sharma A, Kumar P, Kumar A, Bharadwaj A, Saini M, Kardon G, Mathew SJ. 2020. Myosin heavy chain-embryonic regulates skeletal muscle differentiation during mammalian development. Development 147 (7): dev184507


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Kraus RS, Cornelison DDW, Kardon G, Shapiro MD, and Koch PL. 2020. Science at Sundance 2020. Science 367 (6483): 1188-1191


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Comai G, Heude E, Mella S, Paisant S, Pala F, Gallardo M, Langa F, Kardon G, Gopalakrishnan S, Tajbakhsh S. 2019. A distinct cardiopharyngeal mesoderm genetic hierarchy establishes antero-posterior patterning of esophagus striated muscle. eLife Sept 19; 8:e47460.


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Heden TD, Johnson JM, Ferrara PJ, Eshima H, Verkerke ARP, Wentzler EJ, Siripoksup P, Narowski TM, Coleman CB, Lin CT, Ryan TE, Reidy PT, de Castro Brás LE, Karner CM, Burant CF, Maschek JA, Cox JE, Mashek DG, Kardon G, Boudina S, Zeczycki TN, Rutter J, Shaikh SR, Vance JE, Drummond MJ, Neufer PD, Funai K. 2019. Mitochondrial PE potentiates respiratory enzymes to amplify skeletal muscle aerobic capacity. Science Advances 5(9): eaax8352


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Reidy PT, McKenzie AL, Mahmassanii ZS, Petrocelli JJ, Nelson DB, Lindsay CC, Gardner JE, Morrow VR, Keefe AC, Huffaker TB, Stoddard GJ, Kardon G, O’Connell RM, and Drummond MJ. 2019. Aging impairs mouse skeletal macrophage polarization and muscle-specific abundance during recovery from disuse. American Journal of Physiology-Endocrinology and Metabolism 317 (1):E85-E98


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Sefton EM and G Kardon. 2019. Connecting muscle development, birth defects, and evolution: An essential role for muscle connective tissue. Current Topics in Developmental Biology. 132: 137-176


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Krauss RS, MD Shapiro, PL Koch, DD Cornelison, G Kardon. 2019. Science at Sundance. Science 363 (6433): 1270-1274


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Heude E, M Tesarova, EM Sefton, E Jullian, N Adachi, A Grimaldi, T Zikmund, J Kaiser, G Kardon, RG Kelly, S Tajbakhsh. 2018 eLife e40179.


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Collins BC and G Kardon. 2018. Won’t you be my neighbor? Muscle stem cells recruit endothelial cells to their niche. Cell Stem Cell 23(4): 455-456.


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Kardon G. 2018. Life in Triplicate (review of film Three Identical Strangers). Science 359(6381):1222


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Sefton EM, M Gallardo, G Kardon. 2018. Developmental origin and morphogenesis of the diaphragm, an essential mammalian muscle. Developmental Biology 440(2):64-73


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Sharma A, M Agarwal, A Kumar, P Kumar, M Saini, G Kardon, SJ Mathew. 2018 Myosin heavy chain-embryonic is a crucial regulator of skeletal muscle development and differentiation. Biorxiv.


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Yamamoto M, NP Legendre, AA Biswas, A Lawton, S Yamamoto, S Tajbakhsh, G Kardon, DJ Goldhamer. 2018 Loss of MyoD and Myf5 in skeletal muscle stem cells results in altered myogenic programming and failed regeneration. Stem Cell Reports.


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Kardon, G, KG Ackerman, DJ McCulley, Y Shen, J Wynn, L Shang, E Bogenschutz, X Sun, WK Chung. 2017. Congenital Diaphragmatic Hernias: from genes to mechanisms to therapies. Disease Models and Mechanisms 10(8): 955-979.


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Wan Y, H Otsuna, HA Holman, B Bagley, M Ito, AK Lewis, M Colasanto, G Kardon, C Hansen. 2017. FluoRender: joint freehand segmentation and visualization for many-channel fluorescence data analysis. BMC Bioinformatics 18(1) 280.


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Kardon, G. 2017. Step out of the lab and engage. Science 355(6330):1234.


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Kikani, CK, X Wu, L Paul, H Sabic, Z Shen, A Shakya, A Keefe, C Villanueva, G Kardon, B Graves, D Tantin, J Rutter. 2016. Pask integrates hormonal signaling with histone modification via Wdr5 phosphorylation to drive myogenesis. eLife


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Colasanto MP, S Eyal, P Mohassel, M Bamshad, C Bonnemman, E Zelzer, AM Moon, Kardon G. 2016. Development of a subset of forelimb muscles and their attachments sites requires the ulnar-mammary syndrome gene Tbx3. Disease Models and Mechanisms 


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Domyan ET, Z Kronenberg, CR Infante, AI Vickrey, SA Stringham, R Bruders, MW Guernsey, S Park, J Payne, RB Beckstead, G Kardon, D Menke, M Yandell, M Shapiro (2016). Molecular shifts in limb identity underlie development of feathered feet in two domestic avian species. eLife, 5.


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Keefe, AC and G Kardon. 2015. A new role for dystrophin in muscle stem cells. Nature Medicine 21 (12): 1391-1392.


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Nogueira, JM, K Hawrot, C Sharpe, A Noble, WM Wood, EC Jorge, DJ Goldhamer, G Kardon, and GS Dietrich. 2015. The emergence of Pax7-expressing muscle stem cells during vertebrate head muscle development. Frontiers in Aging Neruoscience 7: Article 62.


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Keefe, AC, JA Lawson, SD Flygare, ZD Fox, MP Colasanto, SJ Mathew, M Yandell, G Kardon. 2015. Muscle stem cells contribute to myofibres in sedentary adult mice. Nature Communications (6): 1-11.


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Merrell, AJ, BJ Ellis, ZD Fox, JA Lawson, JA Weiss, G Kardon. 2015. Muscle connective tissue controls development of the diaphragm and is a source of congenital diaphragmatic hernias. Nature Genetics 47(5): 496-505.


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Murphy, MM, AC Keefe, JA Lawson, SD Flygare, M Yandell, G Kardon 2014. Transiently active Wnt/beta-catenin signaling is not required but must be silenced for stem cell function during muscle regeneration. Stem Cell Reports 2: 475-488.


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Lours-Calet, C, LE Alvares, AS El-Hanfy, S Gandesha, EH Walters, DS Sobreira, KR Wotton, EC Jorge, JA Lawson, AK Lewis, M Tada, C Sharpe, G Kardon, S Dietrich. 2014. Evolutionary conserved morphogenetic movements at the vertebrate head-trunk interface coordinate the transport and assembly of hypopharyngeal structures. Developmental Biology 390: 231-246.


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Rohatgi, A, JC Corbo, K Monte, S Higgs, DL Vanlandingham, G Kardon, DJ Lenschow. 2014. Infection of myofibers contributes to increased pathogenicity during infection with an epidemic strain of Chikungunya virus. Journal of Virology 88(5): 2414-2425.


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Merrell, AJ and G Kardon. 2013. Development of the diaphragm - a skeletal muscle essential for mammalian respiration. FEBS Journal 280(17): 4026-4035.


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Hu, J. K-H., E McGlinn, BD Harfe, G Kardon, CJ Tabin. 2012. Autonomous and nonautonomous roles of Hedgehog signling in regulating limb muscle formation. Genes and Development 26: 2088-2102


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Wan, Y., A. K. Lewis, M. Colasanto, M. van Langeveld, G. Kardon, C. Hansen. 2012. A practical workflow for making anatomical atlases for biological research. IEEE Computer Graphics and Applications’ Special Issue – Biomedical Applications: From Data Capture to Modeling 99:70-80

Tutorials for making anatomical atlases

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Murphy, MM, JA Lawson, SJ Mathew, DA Hutcheson, G Kardon. 2011. Satellite cells, connective tissue fibroblasts, and their interactions are crucial for muscle regeneration. Development 138(17): 3625-3637.


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Kardon, G. 2011. Meet the Neighbors: Batsheva Seminar on Integrative Perspectives on the Development of the Musculoskeletal System.Development 138(13):2855-2859


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Murphy, MM and G Kardon. 2011. Origin of vertebrate limb muscle: the role of progenitors and myoblasts. Invited review for Current Topics in Developmental Biology 96:1-32


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Mathew, SJ, JM Hansen, AJ Merrell, MM Murphy, JA Lawson, DA Hutcheson, MS Hansen, M Angus-Hill, G Kardon. 2011. Connective tissue fibroblasts and Tcf4 regulate myogenesis. Development 138:371-384


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Hutcheson, DA and G Kardon. 2009. Genetic manipulations reveal dynamic cell and gene functions: cre-ating a new view of myogenesis. Cell Cycle 8 (22): 1-4


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Hutcheson, DA, J Zhao, AJ Merrell, M Haldar, G Kardon.  2009.  Embryonic and fetal limb myogenic cells are derived from developmentally distinct progenitors and have different requirements for b-catenin. Genes and Development 23(8): 997-1013


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Schienda, J, K Engleka, , S Jun,  MS Hansen,  J Epstein, CJ Tabin, LM Kunkel, G Kardon. 2006.  Somitic origin of limb muscle satellite and side population cells.  PNAS 103(4): 945-950


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Kardon, G, TA Heanue, CJ Tabin.  2004.  The Pax/Six/Eya/Dach network in development and evolution.  In Modularity in Development and Evolution, eds. G. Schlosser and G. Wagner, Chicago University Press


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Kardon, G, BD Harfe, CJ Tabin.  2003 A Tcf4-positive mesodermal population provides a prepattern for vertebrate limb muscle patterning. Developmental Cell 5: 937-944


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Kardon, G, JK Campbell, CJ Tabin.  2002.  Local extrinsic signals determine muscle and endothelial cell fate and patterning in the vertebrate limb.  Developmental Cell 3: 533-546


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Kardon, G, TA Heanue, CJ Tabin.  2002.  Pax3 and Dach2 positive regulation in the developing somite.  Developmental Dynamics 224(3): 350-355


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Kardon, G. 1998. Muscle and tendon morphogenesis in the avian hind limb.  Development 125(20): 4019-4032


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Kardon, G.  1998.  Evidence from the fossil record of an exaptation: conchiolin layers in corbulid bivalves. Evolution 52(1): 68-79